Les simulateurs¶
Simulations de Données Génomiques à grande échelle¶
Simulateurs de coalescents¶
- ms : Richard R. Hudson écrit en C http://home.uchicago.edu/~rhudson1/source.html
- msms : Gregory Ewing, Joachim Hermisson http://www.mabs.at/ewing/msms/index.shtml
- mshot : Garrett Hellenthal, Matthew Stephens http://home.uchicago.edu/~rhudson1/
- cosi : Shaffner http://www.broadinstitute.org/~sfs/cosi/
- simcoal : Christian N. K. Anderson, Uma Ramakrishnan, Yvonne L. Chan, Elizabeth A. Hadly http://www.stanford.edu/group/hadlylab/ssc/index.html
- genome : Liming Liang, Sebastian Zöllner, Gonçalo R. Abecasis http://www.sph.umich.edu/csg/liang/genome/
Simulateurs Forward¶
- simuPOP : simuPOP is a general-purpose individual-based forward-time population genetics simulation environment. interface en langage Python http://simupop.sourceforge.net/Main/HomePage installation
- QMSim : http://www.aps.uoguelph.ca/~msargol/qmsim/ binaire (windows,linux)
- LDSO : Florence Ytournel